Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm15329-201ENSMUST00000121408 155 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm15549-201ENSMUST00000121595 622 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm25668-201ENSMUST00000157700 129 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm27441-201ENSMUST00000185000 105 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm29499-201ENSMUST00000189151 486 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm28329-201ENSMUST00000191208 689 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm29171-201ENSMUST00000191397 486 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm37259-201ENSMUST00000193903 849 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.73□□□□□ -0.53
Ccdc28aQ8CEI3 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Gm7504-201ENSMUST00000201449 424 ntBASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Gm32111-201ENSMUST00000207689 846 ntBASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ccdc28aQ8CEI3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm14723-201ENSMUST00000118686 215 ntBASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm15374-201ENSMUST00000119313 844 ntBASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm23085-201ENSMUST00000157849 293 ntBASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm38321-201ENSMUST00000195053 235 ntBASIC11.71□□□□□ -0.53
Ccdc28aQ8CEI3 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms