Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.02□□□□□ -0.65
Ccdc28bQ8CEG5 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm7742-201ENSMUST00000167648 1527 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm7732-201ENSMUST00000170486 1527 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm7740-201ENSMUST00000186171 1527 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm7736-201ENSMUST00000096981 1527 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm11509-201ENSMUST00000117358 325 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm10807-201ENSMUST00000177134 795 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm44651-201ENSMUST00000207343 372 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm45113-201ENSMUST00000207518 165 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm17827-201ENSMUST00000211825 742 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gm21769-201ENSMUST00000211922 111 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 AC149588.2-201ENSMUST00000228182 1859 ntBASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 A530021J07Rik-202ENSMUST00000207727 1406 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccdc28bQ8CEG5 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Gm22846-201ENSMUST00000157706 270 ntBASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Gm43184-201ENSMUST00000197247 542 ntBASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Gm42588-201ENSMUST00000200538 1297 ntBASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Gm42867-201ENSMUST00000202995 469 ntBASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 AC130829.1-201ENSMUST00000221548 494 ntBASIC11□□□□□ -0.65
Ccdc28bQ8CEG5 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms