Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.28□□□□□ -0.44
Trim9Q8C7M3 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim9Q8C7M3 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim9Q8C7M3 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Trim9Q8C7M3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
Trim9Q8C7M3 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim9Q8C7M3 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Trim9Q8C7M3 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim9Q8C7M3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Trim9Q8C7M3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm11573-201ENSMUST00000119956 394 ntBASIC12.27□□□□□ -0.45
Trim9Q8C7M3 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim9Q8C7M3 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Gm11246-201ENSMUST00000120880 345 ntBASIC12.26□□□□□ -0.45
Trim9Q8C7M3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Gm27910-201ENSMUST00000185004 107 ntBASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Gm37301-201ENSMUST00000195412 568 ntBASIC12.26□□□□□ -0.45
Trim9Q8C7M3 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.26□□□□□ -0.45
Trim9Q8C7M3 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim9Q8C7M3 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms