Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trub1Q8C0D0 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gm6485-201ENSMUST00000160676 439 ntBASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gm5599-201ENSMUST00000209602 788 ntBASIC11.48□□□□□ -0.57
Trub1Q8C0D0 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.48□□□□□ -0.57
Trub1Q8C0D0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trub1Q8C0D0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gm26461-201ENSMUST00000175064 290 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.47□□□□□ -0.57
Trub1Q8C0D0 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trub1Q8C0D0 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms