Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Smg1Q8BKX6 Gm14048-201ENSMUST00000121864 1268 ntBASIC9.15□□□□□ -0.95
Smg1Q8BKX6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Smg1Q8BKX6 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.15□□□□□ -0.95
Smg1Q8BKX6 Mir8111-201ENSMUST00000184463 137 ntBASIC9.15□□□□□ -0.95
Smg1Q8BKX6 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 AC160138.2-201ENSMUST00000220255 1531 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gm12397-201ENSMUST00000117674 615 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gm11929-201ENSMUST00000118175 945 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gm25319-201ENSMUST00000122552 325 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gm22669-201ENSMUST00000158723 318 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gm22994-201ENSMUST00000175422 82 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gm44716-201ENSMUST00000209007 710 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 AC129590.1-201ENSMUST00000225573 852 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 AC149588.2-201ENSMUST00000228182 1859 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Mir675-201ENSMUST00000102320 84 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Rpain-202ENSMUST00000108529 282 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Olfr649-201ENSMUST00000060440 939 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Btrc-209ENSMUST00000224478 2194 ntBASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Sun1-201ENSMUST00000058716 4134 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Smg1Q8BKX6 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm27200-201ENSMUST00000184626 657 ntTSL 3 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm17764-201ENSMUST00000185925 391 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 AC120406.1-201ENSMUST00000220362 482 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 CT025547.1-201ENSMUST00000225127 578 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Pla2g2a-201ENSMUST00000077582 784 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm38058-201ENSMUST00000194323 4368 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm13543-201ENSMUST00000121230 796 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm5274-201ENSMUST00000182641 1003 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gnpnat1-202ENSMUST00000226276 710 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm8864-201ENSMUST00000118653 1010 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm18859-201ENSMUST00000118792 825 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm7456-201ENSMUST00000182862 1011 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Gm7516-201ENSMUST00000186198 706 ntBASIC9.13□□□□□ -0.95
Smg1Q8BKX6 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms