Protein–RNA interactions for Protein: Q8BFW4

Trim65, Tripartite motif-containing protein 65, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim65Q8BFW4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm12624-201ENSMUST00000177615 382 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm12621-201ENSMUST00000177760 382 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm12615-201ENSMUST00000177970 382 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm12622-201ENSMUST00000177975 382 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm12627-201ENSMUST00000178412 382 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm12625-201ENSMUST00000179122 382 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm12614-201ENSMUST00000179586 382 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm12613-201ENSMUST00000180323 382 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm3786-201ENSMUST00000202659 378 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Mt1-202ENSMUST00000211807 1085 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim65Q8BFW4 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gm14263-201ENSMUST00000117955 746 ntBASIC11.92□□□□□ -0.5
Trim65Q8BFW4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Mir1943-201ENSMUST00000158276 73 ntBASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gm30946-201ENSMUST00000198288 724 ntBASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gm5302-201ENSMUST00000202130 796 ntBASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gm10020-201ENSMUST00000081993 612 ntBASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trim65Q8BFW4 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 BC043934-202ENSMUST00000185694 2356 ntBASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.91□□□□□ -0.5
Trim65Q8BFW4 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms