Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Actn1-202ENSMUST00000167327 2664 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Aplp2-201ENSMUST00000072634 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Cyp51-201ENSMUST00000001507 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm14441-201ENSMUST00000121960 540 ntBASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Ralgapb-202ENSMUST00000109485 6709 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf220Q6PDX6 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm14644-201ENSMUST00000116671 647 ntBASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm6114-201ENSMUST00000182472 968 ntBASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm5745-201ENSMUST00000183748 313 ntBASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm29396-201ENSMUST00000185659 716 ntBASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm9230-201ENSMUST00000188228 532 ntBASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm37489-201ENSMUST00000191883 159 ntBASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm45880-201ENSMUST00000213041 853 ntBASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Ilf3-204ENSMUST00000213603 3430 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 4930451G09Rik-201ENSMUST00000090457 2206 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gm42449-201ENSMUST00000200349 2258 ntBASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Rnf220Q6PDX6 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Lamp2-202ENSMUST00000061755 3604 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Adam1b-201ENSMUST00000079368 3338 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Rnf220Q6PDX6 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms