Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm42867-201ENSMUST00000202995 469 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Gm8385-201ENSMUST00000058999 643 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Smarcd3Q6P9Z1 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm23085-201ENSMUST00000157849 293 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.22□□□□□ -0.77
Smarcd3Q6P9Z1 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms