Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm12795-201ENSMUST00000117594 539 ntBASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm16030-201ENSMUST00000159098 603 ntBASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm44814-201ENSMUST00000207018 434 ntBASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm18514-201ENSMUST00000218980 436 ntBASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm9111-201ENSMUST00000219394 709 ntBASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vps54Q5SPW0 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Saa-ps-201ENSMUST00000211148 320 ntBASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vps54Q5SPW0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Mir453-201ENSMUST00000104732 82 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm6322-201ENSMUST00000118789 1004 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm11952-201ENSMUST00000121172 821 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm22442-201ENSMUST00000157256 144 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm8194-201ENSMUST00000159783 859 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm17192-201ENSMUST00000169031 511 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm43671-201ENSMUST00000200422 433 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 AC159196.1-201ENSMUST00000225524 377 ntBASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps54Q5SPW0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms