Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx49Q4FZF3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ddx49Q4FZF3 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ddx49Q4FZF3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm13094-201ENSMUST00000117930 409 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm12129-201ENSMUST00000120104 1147 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm15982-201ENSMUST00000121681 554 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm5529-201ENSMUST00000165691 891 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm17796-201ENSMUST00000189015 1213 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm8384-201ENSMUST00000190905 704 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm7238-201ENSMUST00000206467 973 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 AC164556.1-201ENSMUST00000221318 751 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Arhgef33-210ENSMUST00000225548 456 ntBASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ddx49Q4FZF3 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms