Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Gm12622-201ENSMUST00000177975 382 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12627-201ENSMUST00000178412 382 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12625-201ENSMUST00000179122 382 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12614-201ENSMUST00000179586 382 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm12613-201ENSMUST00000180323 382 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm43916-201ENSMUST00000205062 967 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm45118-201ENSMUST00000208928 825 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm6722-201ENSMUST00000221586 390 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm6781-201ENSMUST00000038304 1242 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Olfr584-201ENSMUST00000098210 964 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.86□□□□□ -0.51
Syne3Q4FZC9 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm11949-201ENSMUST00000117640 372 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm14585-201ENSMUST00000120713 634 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm15329-201ENSMUST00000121408 155 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm21092-201ENSMUST00000178995 955 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm43947-201ENSMUST00000203019 959 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Syne3Q4FZC9 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Syne3Q4FZC9 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms