Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 H2al1a-201ENSMUST00000188439 501 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm45795-201ENSMUST00000211847 400 ntBASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Krtap29-1-201ENSMUST00000105051 1029 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Mrps33-202ENSMUST00000114797 500 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm5627-201ENSMUST00000178539 931 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Mir7011-201ENSMUST00000183768 73 ntBASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.25□□□□□ -0.77
Spg11Q3UHA3 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm30619-201ENSMUST00000213962 686 ntBASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 A1cf-204ENSMUST00000224564 1432 ntBASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Spg11Q3UHA3 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm5274-201ENSMUST00000182641 1003 ntBASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm17764-201ENSMUST00000185925 391 ntBASIC10.24□□□□□ -0.77
Spg11Q3UHA3 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 CT025538.1-201ENSMUST00000223638 369 ntBASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Gm8806-201ENSMUST00000120076 1407 ntBASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Spg11Q3UHA3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Spg11Q3UHA3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms