Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ebf1Q07802 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.36□□□□□ -0.59
Ebf1Q07802 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.36□□□□□ -0.59
Ebf1Q07802 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ebf1Q07802 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Ebf1Q07802 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Ebf1Q07802 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf1Q07802 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf1Q07802 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf1Q07802 Gm14071-201ENSMUST00000117817 509 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Gm8302-201ENSMUST00000119217 852 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Gm12712-201ENSMUST00000120676 801 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Gm25830-201ENSMUST00000158923 132 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Gm23694-201ENSMUST00000179335 110 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.35□□□□□ -0.59
Ebf1Q07802 Ighv1-2-201ENSMUST00000195325 378 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 AC158392.3-201ENSMUST00000224271 1284 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.35□□□□□ -0.59
Ebf1Q07802 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf1Q07802 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ebf1Q07802 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.35□□□□□ -0.59
Ebf1Q07802 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm15528-201ENSMUST00000117821 864 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm14213-201ENSMUST00000119778 768 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm20614-201ENSMUST00000177106 632 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Mir7051-201ENSMUST00000184167 73 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm42779-201ENSMUST00000198807 406 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm6855-201ENSMUST00000206307 790 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm18499-201ENSMUST00000220808 1021 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 AC132260.2-201ENSMUST00000224482 344 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms