Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.74□□□□□ -0.53
Cntn3Q07409 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.74□□□□□ -0.53
Cntn3Q07409 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.74□□□□□ -0.53
Cntn3Q07409 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.74□□□□□ -0.53
Cntn3Q07409 Gm39288-201ENSMUST00000210554 446 ntBASIC11.74□□□□□ -0.53
Cntn3Q07409 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.74□□□□□ -0.53
Cntn3Q07409 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cntn3Q07409 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cntn3Q07409 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cntn3Q07409 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.74□□□□□ -0.53
Cntn3Q07409 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.74□□□□□ -0.53
Cntn3Q07409 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.74□□□□□ -0.53
Cntn3Q07409 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cntn3Q07409 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.74□□□□□ -0.53
Cntn3Q07409 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.73□□□□□ -0.53
Cntn3Q07409 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.73□□□□□ -0.53
Cntn3Q07409 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.73□□□□□ -0.53
Cntn3Q07409 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.73□□□□□ -0.53
Cntn3Q07409 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Cntn3Q07409 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cntn3Q07409 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Cntn3Q07409 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm12106-201ENSMUST00000116006 1200 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm14807-201ENSMUST00000116640 983 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm11628-201ENSMUST00000117568 171 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm14270-201ENSMUST00000118388 846 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm11422-201ENSMUST00000118925 1103 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cntn3Q07409 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm9116-201ENSMUST00000192400 1018 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm44323-201ENSMUST00000198689 129 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm5599-201ENSMUST00000209602 788 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.72□□□□□ -0.53
Cntn3Q07409 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms