Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Cacna1aP97445 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.36□□□□□ -0.75
Cacna1aP97445 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Cacna1aP97445 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cacna1aP97445 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm15617-201ENSMUST00000118973 771 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm14113-201ENSMUST00000121399 976 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm11736-201ENSMUST00000121468 505 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm25343-201ENSMUST00000157460 107 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm7765-201ENSMUST00000182585 974 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Mir6359-201ENSMUST00000183668 81 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm27440-201ENSMUST00000184785 107 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm18010-201ENSMUST00000203553 202 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Cacna1aP97445 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Lect2-202ENSMUST00000225183 823 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Gm5292-201ENSMUST00000073317 580 ntBASIC10.36□□□□□ -0.75
Cacna1aP97445 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Cacna1aP97445 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Cacna1aP97445 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Gm5822-201ENSMUST00000161562 1378 ntBASIC10.35□□□□□ -0.75
Cacna1aP97445 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.35□□□□□ -0.75
Cacna1aP97445 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.35□□□□□ -0.75
Cacna1aP97445 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC10.35□□□□□ -0.75
Cacna1aP97445 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Gm42732-201ENSMUST00000202887 1197 ntBASIC10.35□□□□□ -0.75
Cacna1aP97445 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.35□□□□□ -0.75
Cacna1aP97445 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Cacna1aP97445 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.35□□□□□ -0.75
Cacna1aP97445 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Cacna1aP97445 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Cacna1aP97445 Mir1249-201ENSMUST00000116791 98 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Mir1190-201ENSMUST00000116925 96 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm8226-201ENSMUST00000190511 798 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm7727-201ENSMUST00000219830 671 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 AC154477.1-201ENSMUST00000226515 773 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 AC137842.2-201ENSMUST00000227734 797 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 AC154213.1-201ENSMUST00000228234 583 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Gm12912-201ENSMUST00000121596 1381 ntBASIC10.34□□□□□ -0.75
Cacna1aP97445 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Cacna1aP97445 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Cacna1aP97445 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms