Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SgcbP82349 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SgcbP82349 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.04□□□□□ -0.8
SgcbP82349 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SgcbP82349 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 AC140393.3-201ENSMUST00000228396 1352 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC10.03□□□□□ -0.8
SgcbP82349 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Gm26013-201ENSMUST00000104404 119 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Gm11667-201ENSMUST00000119828 486 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Gm13182-201ENSMUST00000122241 312 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Gm25492-201ENSMUST00000157383 129 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Gm24398-201ENSMUST00000157870 109 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Gm10731-201ENSMUST00000181171 448 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Gm29011-201ENSMUST00000191059 712 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Gm37604-201ENSMUST00000191749 1272 ntBASIC10.03□□□□□ -0.8
SgcbP82349 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Gm37905-201ENSMUST00000195310 341 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Gm43520-201ENSMUST00000197996 164 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
SgcbP82349 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.03□□□□□ -0.8
SgcbP82349 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Zmym2-202ENSMUST00000223669 1281 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.03□□□□□ -0.8
SgcbP82349 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SgcbP82349 Olfr77-202ENSMUST00000217347 5980 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
SgcbP82349 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
SgcbP82349 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcbP82349 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
SgcbP82349 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.02□□□□□ -0.81
SgcbP82349 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.02□□□□□ -0.81
SgcbP82349 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Gm11892-201ENSMUST00000117711 1202 ntBASIC10.02□□□□□ -0.81
SgcbP82349 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
SgcbP82349 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.02□□□□□ -0.81
SgcbP82349 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC10.02□□□□□ -0.81
SgcbP82349 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.02□□□□□ -0.81
SgcbP82349 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.02□□□□□ -0.81
SgcbP82349 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 Gm45071-201ENSMUST00000205353 571 ntBASIC10.02□□□□□ -0.81
SgcbP82349 Gm7439-201ENSMUST00000214053 835 ntBASIC10.02□□□□□ -0.81
SgcbP82349 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
SgcbP82349 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
SgcbP82349 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms