Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC12.42□□□□□ -0.42
Tpm1P58771 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC12.41□□□□□ -0.42
Tpm1P58771 Dchs2-201ENSMUST00000191829 10783 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Tpm1P58771 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 Gm12957-201ENSMUST00000117835 377 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.41□□□□□ -0.42
Tpm1P58771 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Mir7677-201ENSMUST00000184226 67 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.41□□□□□ -0.42
Tpm1P58771 Gm18062-201ENSMUST00000208020 547 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Gm18055-201ENSMUST00000208254 547 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Nln-205ENSMUST00000224945 2486 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tpm1P58771 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tpm1P58771 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.41□□□□□ -0.42
Tpm1P58771 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tpm1P58771 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.4□□□□□ -0.42
Tpm1P58771 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tpm1P58771 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.4□□□□□ -0.42
Tpm1P58771 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Gm12742-201ENSMUST00000117326 410 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.4□□□□□ -0.42
Tpm1P58771 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Gm22846-201ENSMUST00000157706 270 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm20495-201ENSMUST00000173902 235 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm29615-201ENSMUST00000185371 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm28224-201ENSMUST00000186078 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm29001-201ENSMUST00000186177 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm28292-201ENSMUST00000186593 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm28101-201ENSMUST00000187608 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm29076-201ENSMUST00000187689 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm28302-201ENSMUST00000187931 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm28646-201ENSMUST00000188220 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm28205-201ENSMUST00000189177 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm29032-201ENSMUST00000189797 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm28695-201ENSMUST00000190300 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm37448-201ENSMUST00000192795 697 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Tpm1P58771 Gm9353-201ENSMUST00000200472 604 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Gm45113-201ENSMUST00000207518 165 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.4□□□□□ -0.42
Tpm1P58771 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.4□□□□□ -0.42
Tpm1P58771 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Fubp1-202ENSMUST00000166984 6523 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tpm1P58771 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms