Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Atxn1P54254 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Atxn1P54254 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Atxn1P54254 Gm15707-201ENSMUST00000118804 996 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm13624-201ENSMUST00000120263 462 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm15982-201ENSMUST00000121681 554 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC11.14□□□□□ -0.63
Atxn1P54254 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Gm6612-201ENSMUST00000170777 395 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Gm26875-201ENSMUST00000181006 950 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Gm28937-201ENSMUST00000185413 695 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Gm29400-201ENSMUST00000187208 695 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm28662-201ENSMUST00000188446 695 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm28251-201ENSMUST00000188835 695 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm37318-201ENSMUST00000194325 695 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm38017-201ENSMUST00000194768 695 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm37287-201ENSMUST00000195449 695 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Gm37793-201ENSMUST00000195548 695 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.14□□□□□ -0.63
Atxn1P54254 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Atxn1P54254 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Atxn1P54254 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Atxn1P54254 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.13□□□□□ -0.63
Atxn1P54254 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.13□□□□□ -0.63
Atxn1P54254 Gm26976-201ENSMUST00000182929 908 ntBASIC11.13□□□□□ -0.63
Atxn1P54254 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 Gm37851-201ENSMUST00000193871 889 ntBASIC11.13□□□□□ -0.63
Atxn1P54254 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.13□□□□□ -0.63
Atxn1P54254 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.13□□□□□ -0.63
Atxn1P54254 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.13□□□□□ -0.63
Atxn1P54254 Gm17931-201ENSMUST00000208132 634 ntBASIC11.13□□□□□ -0.63
Atxn1P54254 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Atxn1P54254 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.13□□□□□ -0.63
Atxn1P54254 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Atxn1P54254 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.13□□□□□ -0.63
Atxn1P54254 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Atxn1P54254 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Atxn1P54254 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Atxn1P54254 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Atxn1P54254 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms