Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC8.98□□□□□ -0.97
Cd27P41272 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cd27P41272 Gm44158-201ENSMUST00000203881 505 ntBASIC8.98□□□□□ -0.97
Cd27P41272 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Cd27P41272 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd27P41272 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd27P41272 AC122346.3-201ENSMUST00000223983 306 ntBASIC8.98□□□□□ -0.97
Cd27P41272 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Cd27P41272 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC8.98□□□□□ -0.97
Cd27P41272 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cd27P41272 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Cd27P41272 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cd27P41272 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Cd27P41272 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Cd27P41272 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
Cd27P41272 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC8.97□□□□□ -0.97
Cd27P41272 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cd27P41272 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC8.97□□□□□ -0.97
Cd27P41272 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC8.97□□□□□ -0.97
Cd27P41272 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC8.97□□□□□ -0.97
Cd27P41272 Gm16397-201ENSMUST00000122201 494 ntBASIC8.97□□□□□ -0.97
Cd27P41272 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC8.97□□□□□ -0.97
Cd27P41272 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC8.97□□□□□ -0.97
Cd27P41272 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC8.97□□□□□ -0.97
Cd27P41272 Gm25554-201ENSMUST00000158075 113 ntBASIC8.97□□□□□ -0.97
Cd27P41272 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC8.97□□□□□ -0.97
Cd27P41272 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC8.97□□□□□ -0.97
Cd27P41272 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Cd27P41272 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Gm45550-201ENSMUST00000209380 946 ntBASIC8.97□□□□□ -0.97
Cd27P41272 Gm39288-201ENSMUST00000210554 446 ntBASIC8.97□□□□□ -0.97
Cd27P41272 Gm2875-201ENSMUST00000211333 360 ntBASIC8.97□□□□□ -0.97
Cd27P41272 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cd27P41272 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cd27P41272 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cd27P41272 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cd27P41272 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Cd27P41272 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC8.97□□□□□ -0.97
Cd27P41272 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Cd27P41272 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Cd27P41272 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Cd27P41272 Gm5739-201ENSMUST00000208601 1703 ntBASIC8.97□□□□□ -0.97
Cd27P41272 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Cd27P41272 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC8.96□□□□□ -0.97
Cd27P41272 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cd27P41272 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cd27P41272 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cd27P41272 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Cd27P41272 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Cd27P41272 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Cd27P41272 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cd27P41272 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Cd27P41272 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms