Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.15□□□□□ -0.94
VhlP40338 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
VhlP40338 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
VhlP40338 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.15□□□□□ -0.94
VhlP40338 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
VhlP40338 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
VhlP40338 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Mrip-ps-201ENSMUST00000184613 940 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm8856-201ENSMUST00000185254 1144 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm29615-201ENSMUST00000185371 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm28224-201ENSMUST00000186078 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm29001-201ENSMUST00000186177 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm28292-201ENSMUST00000186593 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm7895-201ENSMUST00000187459 1173 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm28101-201ENSMUST00000187608 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm29076-201ENSMUST00000187689 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm28302-201ENSMUST00000187931 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm28646-201ENSMUST00000188220 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm28205-201ENSMUST00000189177 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm29032-201ENSMUST00000189797 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm28695-201ENSMUST00000190300 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm37448-201ENSMUST00000192795 697 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Gm17812-201ENSMUST00000204935 318 ntBASIC9.15□□□□□ -0.94
VhlP40338 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC9.15□□□□□ -0.94
VhlP40338 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.15□□□□□ -0.94
VhlP40338 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.15□□□□□ -0.94
VhlP40338 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.15□□□□□ -0.94
VhlP40338 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.15□□□□□ -0.94
VhlP40338 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
VhlP40338 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.15□□□□□ -0.94
VhlP40338 Gm25125-201ENSMUST00000083340 136 ntBASIC9.15□□□□□ -0.94
VhlP40338 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.15□□□□□ -0.94
VhlP40338 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
VhlP40338 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.15□□□□□ -0.94
VhlP40338 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.15□□□□□ -0.94
VhlP40338 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
VhlP40338 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VhlP40338 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VhlP40338 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.15□□□□□ -0.95
VhlP40338 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VhlP40338 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
VhlP40338 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
VhlP40338 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VhlP40338 Spata33-207ENSMUST00000212760 4074 ntBASIC9.15□□□□□ -0.95
VhlP40338 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
VhlP40338 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
VhlP40338 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.14□□□□□ -0.95
VhlP40338 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Gm13665-201ENSMUST00000120830 528 ntBASIC9.14□□□□□ -0.95
VhlP40338 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.14□□□□□ -0.95
VhlP40338 Gm15276-201ENSMUST00000145953 498 ntBASIC9.14□□□□□ -0.95
VhlP40338 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
VhlP40338 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VhlP40338 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.14□□□□□ -0.95
VhlP40338 Gm43667-201ENSMUST00000198616 1095 ntBASIC9.14□□□□□ -0.95
VhlP40338 Gm43758-201ENSMUST00000199500 367 ntBASIC9.14□□□□□ -0.95
VhlP40338 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.14□□□□□ -0.95
VhlP40338 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.14□□□□□ -0.95
VhlP40338 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.14□□□□□ -0.95
VhlP40338 Gm13097-201ENSMUST00000210722 397 ntBASIC9.14□□□□□ -0.95
VhlP40338 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.14□□□□□ -0.95
VhlP40338 Gm6867-201ENSMUST00000219165 425 ntBASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms