Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.5□□□□□ -0.57
Cxcl12P40224 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cxcl12P40224 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm3527-201ENSMUST00000198905 460 ntBASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.5□□□□□ -0.57
Cxcl12P40224 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.5□□□□□ -0.57
Cxcl12P40224 Fibp-205ENSMUST00000225141 1209 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cxcl12P40224 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cxcl12P40224 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cxcl12P40224 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl12P40224 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm27390-201ENSMUST00000184516 176 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm38103-201ENSMUST00000191707 864 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm35611-201ENSMUST00000205323 799 ntTSL 3 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm29689-201ENSMUST00000221076 589 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cxcl12P40224 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cxcl12P40224 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.49□□□□□ -0.57
Cxcl12P40224 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.48□□□□□ -0.57
Cxcl12P40224 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Gm12684-201ENSMUST00000118675 999 ntBASIC11.48□□□□□ -0.57
Cxcl12P40224 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.48□□□□□ -0.57
Cxcl12P40224 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.48□□□□□ -0.57
Cxcl12P40224 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC11.48□□□□□ -0.57
Cxcl12P40224 Gm7833-201ENSMUST00000183288 990 ntBASIC11.48□□□□□ -0.57
Cxcl12P40224 Gm38038-201ENSMUST00000193803 259 ntBASIC11.48□□□□□ -0.57
Cxcl12P40224 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Cxcl12P40224 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms