Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.77□□□□□ -0.85
Upk2P38575 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Upk2P38575 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC9.77□□□□□ -0.85
Upk2P38575 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Gm25125-201ENSMUST00000083340 136 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.77□□□□□ -0.85
Upk2P38575 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Gm9333-201ENSMUST00000205452 1323 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.77□□□□□ -0.85
Upk2P38575 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Upk2P38575 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Upk2P38575 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.76□□□□□ -0.85
Upk2P38575 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Gm37458-201ENSMUST00000194055 410 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Gm44323-201ENSMUST00000198689 129 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Gm18393-201ENSMUST00000208349 1131 ntBASIC9.76□□□□□ -0.85
Upk2P38575 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.76□□□□□ -0.85
Upk2P38575 AC171241.1-201ENSMUST00000228144 1166 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Upk2P38575 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.76□□□□□ -0.85
Upk2P38575 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Upk2P38575 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Upk2P38575 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Upk2P38575 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
Upk2P38575 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC9.75□□□□□ -0.85
Upk2P38575 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Upk2P38575 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC9.75□□□□□ -0.85
Upk2P38575 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC9.75□□□□□ -0.85
Upk2P38575 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Upk2P38575 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC9.75□□□□□ -0.85
Upk2P38575 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Gm37301-201ENSMUST00000195412 568 ntBASIC9.75□□□□□ -0.85
Upk2P38575 Gm9645-201ENSMUST00000197131 792 ntBASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms