Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.34□□□□□ -0.75
Sftpa1P35242 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Sftpa1P35242 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Sftpa1P35242 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm12986-201ENSMUST00000119037 967 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm7572-201ENSMUST00000182616 766 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Ighv1-70-201ENSMUST00000196509 351 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm45310-201ENSMUST00000210436 275 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sftpa1P35242 AC159002.1-201ENSMUST00000226714 924 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sftpa1P35242 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 AC154354.1-203ENSMUST00000225565 1364 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 AC137950.2-202ENSMUST00000227150 1635 ntBASIC10.33□□□□□ -0.76
Sftpa1P35242 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Sftpa1P35242 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Sftpa1P35242 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Sftpa1P35242 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.32□□□□□ -0.76
Sftpa1P35242 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
Sftpa1P35242 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.32□□□□□ -0.76
Sftpa1P35242 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.32□□□□□ -0.76
Sftpa1P35242 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sftpa1P35242 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms