Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC9.29□□□□□ -0.92
Col8a2P25318 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm3671-201ENSMUST00000182463 1007 ntBASIC9.29□□□□□ -0.92
Col8a2P25318 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm44814-201ENSMUST00000207018 434 ntBASIC9.29□□□□□ -0.92
Col8a2P25318 Gm19091-201ENSMUST00000208120 978 ntBASIC9.29□□□□□ -0.92
Col8a2P25318 Gm18706-201ENSMUST00000210053 1066 ntBASIC9.29□□□□□ -0.92
Col8a2P25318 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.29□□□□□ -0.92
Col8a2P25318 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC9.29□□□□□ -0.92
Col8a2P25318 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col8a2P25318 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.29□□□□□ -0.92
Col8a2P25318 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col8a2P25318 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.29□□□□□ -0.92
Col8a2P25318 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col8a2P25318 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.28□□□□□ -0.92
Col8a2P25318 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.28□□□□□ -0.92
Col8a2P25318 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col8a2P25318 Gm11422-201ENSMUST00000118925 1103 ntBASIC9.28□□□□□ -0.92
Col8a2P25318 Gm9673-201ENSMUST00000119287 781 ntBASIC9.28□□□□□ -0.92
Col8a2P25318 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col8a2P25318 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Mir7035-201ENSMUST00000184713 82 ntBASIC9.28□□□□□ -0.92
Col8a2P25318 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC9.28□□□□□ -0.92
Col8a2P25318 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col8a2P25318 Gm9102-201ENSMUST00000219250 465 ntBASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms