Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
IghmP01872 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
IghmP01872 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
IghmP01872 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
IghmP01872 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
IghmP01872 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
IghmP01872 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
IghmP01872 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 AA474408-201ENSMUST00000098110 3339 ntBASIC10.42□□□□□ -0.74
IghmP01872 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 Gm5739-201ENSMUST00000208601 1703 ntBASIC10.42□□□□□ -0.74
IghmP01872 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
IghmP01872 Gm13045-201ENSMUST00000119019 712 ntBASIC10.42□□□□□ -0.74
IghmP01872 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.42□□□□□ -0.74
IghmP01872 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC10.42□□□□□ -0.74
IghmP01872 Gm23699-201ENSMUST00000158835 135 ntBASIC10.42□□□□□ -0.74
IghmP01872 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Gm4654-201ENSMUST00000183305 982 ntBASIC10.42□□□□□ -0.74
IghmP01872 Mir6420-201ENSMUST00000185032 102 ntBASIC10.42□□□□□ -0.74
IghmP01872 Gm44315-201ENSMUST00000203041 219 ntBASIC10.42□□□□□ -0.74
IghmP01872 Gm32111-201ENSMUST00000207689 846 ntBASIC10.42□□□□□ -0.74
IghmP01872 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.42□□□□□ -0.74
IghmP01872 Gm5468-202ENSMUST00000227851 682 ntBASIC10.42□□□□□ -0.74
IghmP01872 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.42□□□□□ -0.74
IghmP01872 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.42□□□□□ -0.74
IghmP01872 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.42□□□□□ -0.74
IghmP01872 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
IghmP01872 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.41□□□□□ -0.74
IghmP01872 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.41□□□□□ -0.74
IghmP01872 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.41□□□□□ -0.74
IghmP01872 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.41□□□□□ -0.74
IghmP01872 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.41□□□□□ -0.74
IghmP01872 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.41□□□□□ -0.74
IghmP01872 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.41□□□□□ -0.74
IghmP01872 Gm4917-201ENSMUST00000121452 650 ntBASIC10.41□□□□□ -0.74
IghmP01872 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.41□□□□□ -0.74
IghmP01872 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
IghmP01872 Gm21092-201ENSMUST00000178995 955 ntBASIC10.41□□□□□ -0.74
IghmP01872 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.41□□□□□ -0.74
IghmP01872 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.41□□□□□ -0.74
IghmP01872 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.41□□□□□ -0.74
IghmP01872 Gm45398-201ENSMUST00000210561 165 ntBASIC10.41□□□□□ -0.74
IghmP01872 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.41□□□□□ -0.74
IghmP01872 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.41□□□□□ -0.74
IghmP01872 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
IghmP01872 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
IghmP01872 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
IghmP01872 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
IghmP01872 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms