Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC8.13□□□□□ -1.11
TcraP01849 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
TcraP01849 Gm44103-201ENSMUST00000204364 3662 ntBASIC8.13□□□□□ -1.11
TcraP01849 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Umodl1-203ENSMUST00000114555 5041 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Chd1-201ENSMUST00000024620 3196 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC8.12□□□□□ -1.11
TcraP01849 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 AC131029.1-201ENSMUST00000226391 2929 ntBASIC8.12□□□□□ -1.11
TcraP01849 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
TcraP01849 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Npc1l1-201ENSMUST00000004505 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Gm22018-201ENSMUST00000104357 131 ntBASIC8.12□□□□□ -1.11
TcraP01849 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC8.12□□□□□ -1.11
TcraP01849 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC8.12□□□□□ -1.11
TcraP01849 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC8.12□□□□□ -1.11
TcraP01849 Gm11573-201ENSMUST00000119956 394 ntBASIC8.12□□□□□ -1.11
TcraP01849 Gm8062-201ENSMUST00000139696 444 ntBASIC8.12□□□□□ -1.11
TcraP01849 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC8.12□□□□□ -1.11
TcraP01849 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC8.12□□□□□ -1.11
TcraP01849 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
TcraP01849 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC8.12□□□□□ -1.11
TcraP01849 Gm29396-201ENSMUST00000185659 716 ntBASIC8.12□□□□□ -1.11
TcraP01849 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Gm17823-201ENSMUST00000217830 1006 ntBASIC8.12□□□□□ -1.11
TcraP01849 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.12□□□□□ -1.11
TcraP01849 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 CT025645.2-201ENSMUST00000223278 3827 ntBASIC8.12□□□□□ -1.11
TcraP01849 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Gm11735-201ENSMUST00000106377 1581 ntBASIC8.12□□□□□ -1.11
TcraP01849 Gm5847-201ENSMUST00000178959 1595 ntBASIC8.12□□□□□ -1.11
TcraP01849 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Txndc16-205ENSMUST00000139526 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Gm37608-201ENSMUST00000195696 1880 ntBASIC8.12□□□□□ -1.11
TcraP01849 Exoc3l4-210ENSMUST00000223050 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Mcc-201ENSMUST00000089874 7858 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Tmem184b-205ENSMUST00000228002 3315 ntBASIC8.12□□□□□ -1.11
TcraP01849 Cacna1c-206ENSMUST00000185345 6579 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 AC154176.2-201ENSMUST00000225376 6429 ntBASIC8.12□□□□□ -1.11
TcraP01849 Ovgp1-201ENSMUST00000000573 2616 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
TcraP01849 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Ddx25-201ENSMUST00000034612 6934 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
TcraP01849 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
TcraP01849 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Gm44062-201ENSMUST00000203312 4857 ntBASIC8.11□□□□□ -1.11
TcraP01849 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Znrf1-202ENSMUST00000166859 3650 ntTSL 5 BASIC8.11□□□□□ -1.11
TcraP01849 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
TcraP01849 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Helz-202ENSMUST00000100305 5953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
TcraP01849 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC8.11□□□□□ -1.11
TcraP01849 St3gal6-207ENSMUST00000137035 4123 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms