Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Gm8384-201ENSMUST00000190905 704 ntBASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Gm43127-201ENSMUST00000195890 2789 ntBASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Gm45258-201ENSMUST00000210042 853 ntBASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clrn2B2RVW2 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm23769-201ENSMUST00000104441 121 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm43244-201ENSMUST00000196994 1285 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm7238-201ENSMUST00000206467 973 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 AC121567.1-201ENSMUST00000227213 842 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Clrn2B2RVW2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Mir181d-201ENSMUST00000102383 72 ntBASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Gm25872-201ENSMUST00000177784 100 ntBASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Gm18014-201ENSMUST00000183369 817 ntBASIC12.9□□□□□ -0.34
Clrn2B2RVW2 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Gm37723-201ENSMUST00000194480 565 ntBASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Gm43564-201ENSMUST00000196185 211 ntBASIC12.9□□□□□ -0.34
Clrn2B2RVW2 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Gm35960-201ENSMUST00000202712 767 ntBASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Gm18001-201ENSMUST00000212023 688 ntBASIC12.9□□□□□ -0.34
Clrn2B2RVW2 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Clrn2B2RVW2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms