Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.35□□□□□ -0.43
Scn3aA2ASI5 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Scn3aA2ASI5 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gm42858-201ENSMUST00000202512 1704 ntBASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gm12418-201ENSMUST00000118116 942 ntBASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gm24346-201ENSMUST00000158712 194 ntBASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gm5340-201ENSMUST00000203733 880 ntBASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 AC134860.2-201ENSMUST00000225277 1036 ntBASIC12.34□□□□□ -0.43
Scn3aA2ASI5 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gm6478-201ENSMUST00000099450 742 ntBASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Scn3aA2ASI5 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn3aA2ASI5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn3aA2ASI5 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn3aA2ASI5 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.33□□□□□ -0.43
Scn3aA2ASI5 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Scn3aA2ASI5 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gm23745-201ENSMUST00000104230 125 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gm19918-201ENSMUST00000194858 400 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gm43778-201ENSMUST00000199438 199 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gm45165-201ENSMUST00000207763 1631 ntBASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Scn3aA2ASI5 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms