Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5538W4VSP6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.7■□□□□ 0.9
Gm5538W4VSP6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5538W4VSP6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.68■□□□□ 0.9
Gm5538W4VSP6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5538W4VSP6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.66■□□□□ 0.9
Gm5538W4VSP6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Gm5538W4VSP6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5538W4VSP6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5538W4VSP6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5538W4VSP6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5538W4VSP6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5538W4VSP6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Gm5538W4VSP6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5538W4VSP6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Gm5538W4VSP6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5538W4VSP6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.64■□□□□ 0.89
Gm5538W4VSP6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5538W4VSP6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.64■□□□□ 0.89
Gm5538W4VSP6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.64■□□□□ 0.89
Gm5538W4VSP6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5538W4VSP6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gm5538W4VSP6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Gm43530-201ENSMUST00000195920 274 ntBASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gm5538W4VSP6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5538W4VSP6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5538W4VSP6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5538W4VSP6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm5538W4VSP6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.62■□□□□ 0.89
Gm5538W4VSP6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5538W4VSP6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gm5538W4VSP6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Gm5538W4VSP6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms