Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afb2S4R1M3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2afb2S4R1M3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2afb2S4R1M3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.24■□□□□ 0.83
H2afb2S4R1M3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2afb2S4R1M3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2afb2S4R1M3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2afb2S4R1M3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Gm9870-201ENSMUST00000063874 645 ntBASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afb2S4R1M3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb2S4R1M3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb2S4R1M3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb2S4R1M3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
H2afb2S4R1M3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb2S4R1M3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb2S4R1M3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.22■□□□□ 0.83
H2afb2S4R1M3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afb2S4R1M3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb2S4R1M3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
H2afb2S4R1M3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb2S4R1M3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb2S4R1M3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb2S4R1M3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb2S4R1M3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
H2afb2S4R1M3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H2afb2S4R1M3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afb2S4R1M3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Gm45102-201ENSMUST00000207427 857 ntBASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
H2afb2S4R1M3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afb2S4R1M3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Gm14117-201ENSMUST00000122417 843 ntBASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Rps24-207ENSMUST00000224568 714 ntBASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
H2afb2S4R1M3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.17■□□□□ 0.82
H2afb2S4R1M3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
H2afb2S4R1M3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb2S4R1M3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb2S4R1M3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb2S4R1M3 Gm22238-201ENSMUST00000175222 88 ntBASIC20.16■□□□□ 0.82
H2afb2S4R1M3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.16■□□□□ 0.82
H2afb2S4R1M3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb2S4R1M3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb2S4R1M3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H2afb2S4R1M3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afb2S4R1M3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
H2afb2S4R1M3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms