Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mrpl40Q9Z2Q5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mrpl40Q9Z2Q5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Mrpl40Q9Z2Q5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.08■□□□□ 0.81
Mrpl40Q9Z2Q5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.08■□□□□ 0.8
Mrpl40Q9Z2Q5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mrpl40Q9Z2Q5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mrpl40Q9Z2Q5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mrpl40Q9Z2Q5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Mrpl40Q9Z2Q5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Mrpl40Q9Z2Q5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Mrpl40Q9Z2Q5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Mrpl40Q9Z2Q5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mrpl40Q9Z2Q5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mrpl40Q9Z2Q5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.07■□□□□ 0.8
Mrpl40Q9Z2Q5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.07■□□□□ 0.8
Mrpl40Q9Z2Q5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mrpl40Q9Z2Q5 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.07■□□□□ 0.8
Mrpl40Q9Z2Q5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Mrpl40Q9Z2Q5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mrpl40Q9Z2Q5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Mrpl40Q9Z2Q5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mrpl40Q9Z2Q5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Mrpl40Q9Z2Q5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mrpl40Q9Z2Q5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mrpl40Q9Z2Q5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mrpl40Q9Z2Q5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Mrpl40Q9Z2Q5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Mrpl40Q9Z2Q5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Serp2-204ENSMUST00000228055 705 ntBASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Gm9870-201ENSMUST00000063874 645 ntBASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Mrpl40Q9Z2Q5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Mrpl40Q9Z2Q5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 Iqck-206ENSMUST00000208658 2891 ntBASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.01■□□□□ 0.79
Mrpl40Q9Z2Q5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Mrpl40Q9Z2Q5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms