Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Gm10849-201ENSMUST00000100397 618 ntBASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Gm37179-201ENSMUST00000194862 823 ntBASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Clcn5Q9WVD4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn5Q9WVD4 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Clcn5Q9WVD4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn5Q9WVD4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn5Q9WVD4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.93■□□□□ 0.94
Clcn5Q9WVD4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Clcn5Q9WVD4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn5Q9WVD4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn5Q9WVD4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn5Q9WVD4 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn5Q9WVD4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Gm26833-201ENSMUST00000180899 440 ntBASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Gm43060-201ENSMUST00000200621 289 ntBASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn5Q9WVD4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.89■□□□□ 0.93
Clcn5Q9WVD4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn5Q9WVD4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn5Q9WVD4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn5Q9WVD4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.89■□□□□ 0.93
Clcn5Q9WVD4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn5Q9WVD4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Clcn5Q9WVD4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn5Q9WVD4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn5Q9WVD4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn5Q9WVD4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn5Q9WVD4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn5Q9WVD4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.87■□□□□ 0.93
Clcn5Q9WVD4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn5Q9WVD4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn5Q9WVD4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn5Q9WVD4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn5Q9WVD4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn5Q9WVD4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn5Q9WVD4 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.86■□□□□ 0.93
Clcn5Q9WVD4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn5Q9WVD4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn5Q9WVD4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn5Q9WVD4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Gm12251-201ENSMUST00000117893 792 ntBASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn5Q9WVD4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Clcn5Q9WVD4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms