Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Col13a1Q9R1N9 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col13a1Q9R1N9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Col13a1Q9R1N9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Gm18671-201ENSMUST00000214826 683 ntBASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col13a1Q9R1N9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col13a1Q9R1N9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Gm10602-201ENSMUST00000098239 609 ntBASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col13a1Q9R1N9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Spcs1-204ENSMUST00000226782 949 ntBASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.1■□□□□ 0.33
Col13a1Q9R1N9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Notumos-201ENSMUST00000151998 2659 ntBASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 AV356131-201ENSMUST00000206201 750 ntBASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col13a1Q9R1N9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Col13a1Q9R1N9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col13a1Q9R1N9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.08■□□□□ 0.33
Col13a1Q9R1N9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col13a1Q9R1N9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col13a1Q9R1N9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col13a1Q9R1N9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col13a1Q9R1N9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Col13a1Q9R1N9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms