Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.6■□□□□ 0.41
Nubp1Q9R060 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.6■□□□□ 0.41
Nubp1Q9R060 Gm10602-201ENSMUST00000098239 609 ntBASIC17.6■□□□□ 0.41
Nubp1Q9R060 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nubp1Q9R060 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp1Q9R060 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp1Q9R060 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nubp1Q9R060 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp1Q9R060 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp1Q9R060 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp1Q9R060 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.59■□□□□ 0.41
Nubp1Q9R060 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp1Q9R060 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.59■□□□□ 0.41
Nubp1Q9R060 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp1Q9R060 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp1Q9R060 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nubp1Q9R060 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nubp1Q9R060 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nubp1Q9R060 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Nubp1Q9R060 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Nubp1Q9R060 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nubp1Q9R060 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Gm10033-202ENSMUST00000211874 928 ntBASIC17.58■□□□□ 0.4
Nubp1Q9R060 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp1Q9R060 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nubp1Q9R060 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp1Q9R060 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp1Q9R060 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.57■□□□□ 0.4
Nubp1Q9R060 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Nubp1Q9R060 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp1Q9R060 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp1Q9R060 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.57■□□□□ 0.4
Nubp1Q9R060 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.57■□□□□ 0.4
Nubp1Q9R060 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp1Q9R060 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp1Q9R060 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nubp1Q9R060 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nubp1Q9R060 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.56■□□□□ 0.4
Nubp1Q9R060 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Nubp1Q9R060 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp1Q9R060 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp1Q9R060 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp1Q9R060 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nubp1Q9R060 Smad6-203ENSMUST00000179458 273 ntBASIC17.55■□□□□ 0.4
Nubp1Q9R060 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.55■□□□□ 0.4
Nubp1Q9R060 Gm42778-201ENSMUST00000199644 553 ntBASIC17.55■□□□□ 0.4
Nubp1Q9R060 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nubp1Q9R060 Gm43530-201ENSMUST00000195920 274 ntBASIC17.54■□□□□ 0.4
Nubp1Q9R060 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.54■□□□□ 0.4
Nubp1Q9R060 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Nubp1Q9R060 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp1Q9R060 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp1Q9R060 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nubp1Q9R060 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp1Q9R060 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp1Q9R060 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nubp1Q9R060 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.53■□□□□ 0.4
Nubp1Q9R060 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.53■□□□□ 0.4
Nubp1Q9R060 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Gm40848-201ENSMUST00000221998 324 ntBASIC17.53■□□□□ 0.4
Nubp1Q9R060 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nubp1Q9R060 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nubp1Q9R060 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nubp1Q9R060 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nubp1Q9R060 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Nubp1Q9R060 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nubp1Q9R060 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nubp1Q9R060 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nubp1Q9R060 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nubp1Q9R060 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp1Q9R060 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.51■□□□□ 0.39
Nubp1Q9R060 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nubp1Q9R060 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp1Q9R060 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp1Q9R060 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp1Q9R060 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp1Q9R060 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp1Q9R060 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp1Q9R060 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nubp1Q9R060 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nubp1Q9R060 Gm6934-201ENSMUST00000194780 1905 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms