Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tlr4Q9QUK6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Gm43530-201ENSMUST00000195920 274 ntBASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Gm6139-201ENSMUST00000079261 882 ntBASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.84■□□□□ 0.77
Tlr4Q9QUK6 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.83■□□□□ 0.77
Tlr4Q9QUK6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Tlr4Q9QUK6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.83■□□□□ 0.77
Tlr4Q9QUK6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.83■□□□□ 0.77
Tlr4Q9QUK6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tlr4Q9QUK6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.83■□□□□ 0.76
Tlr4Q9QUK6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.83■□□□□ 0.76
Tlr4Q9QUK6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tlr4Q9QUK6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tlr4Q9QUK6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Tlr4Q9QUK6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Mir7075-201ENSMUST00000184187 82 ntBASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Tlr4Q9QUK6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tlr4Q9QUK6 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Tlr4Q9QUK6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Tlr4Q9QUK6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tlr4Q9QUK6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Tlr4Q9QUK6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tlr4Q9QUK6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Tlr4Q9QUK6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.78■□□□□ 0.76
Tlr4Q9QUK6 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.78■□□□□ 0.76
Tlr4Q9QUK6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Tlr4Q9QUK6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tlr4Q9QUK6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tlr4Q9QUK6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tlr4Q9QUK6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tlr4Q9QUK6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tlr4Q9QUK6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tlr4Q9QUK6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tlr4Q9QUK6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.75
Tlr4Q9QUK6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tlr4Q9QUK6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Tlr4Q9QUK6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
Tlr4Q9QUK6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tlr4Q9QUK6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tlr4Q9QUK6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tlr4Q9QUK6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tlr4Q9QUK6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Tlr4Q9QUK6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms