Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.22■□□□□ 0.99
Scn5aQ9JJV9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn5aQ9JJV9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Scn5aQ9JJV9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn5aQ9JJV9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn5aQ9JJV9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Scn5aQ9JJV9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC21.21■□□□□ 0.99
Scn5aQ9JJV9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn5aQ9JJV9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn5aQ9JJV9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Scn5aQ9JJV9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn5aQ9JJV9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Scn5aQ9JJV9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Scn5aQ9JJV9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scn5aQ9JJV9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scn5aQ9JJV9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Scn5aQ9JJV9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn5aQ9JJV9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Scn5aQ9JJV9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.19■□□□□ 0.98
Scn5aQ9JJV9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn5aQ9JJV9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn5aQ9JJV9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn5aQ9JJV9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn5aQ9JJV9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.18■□□□□ 0.98
Scn5aQ9JJV9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn5aQ9JJV9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Scn5aQ9JJV9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Gm18671-201ENSMUST00000214826 683 ntBASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Scn5aQ9JJV9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Scn5aQ9JJV9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.16■□□□□ 0.98
Scn5aQ9JJV9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn5aQ9JJV9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Scn5aQ9JJV9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Scn5aQ9JJV9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn5aQ9JJV9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn5aQ9JJV9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Scn5aQ9JJV9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.14■□□□□ 0.98
Scn5aQ9JJV9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.14■□□□□ 0.98
Scn5aQ9JJV9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.14■□□□□ 0.97
Scn5aQ9JJV9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scn5aQ9JJV9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scn5aQ9JJV9 AC112142.1-201ENSMUST00000228796 918 ntBASIC21.14■□□□□ 0.97
Scn5aQ9JJV9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn5aQ9JJV9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Scn5aQ9JJV9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Scn5aQ9JJV9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scn5aQ9JJV9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn5aQ9JJV9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn5aQ9JJV9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn5aQ9JJV9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Scn5aQ9JJV9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Scn5aQ9JJV9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn5aQ9JJV9 Gm42778-201ENSMUST00000199644 553 ntBASIC21.12■□□□□ 0.97
Scn5aQ9JJV9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
Scn5aQ9JJV9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Scn5aQ9JJV9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn5aQ9JJV9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Scn5aQ9JJV9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn5aQ9JJV9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn5aQ9JJV9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn5aQ9JJV9 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.11■□□□□ 0.97
Scn5aQ9JJV9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.11■□□□□ 0.97
Scn5aQ9JJV9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.11■□□□□ 0.97
Scn5aQ9JJV9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scn5aQ9JJV9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Scn5aQ9JJV9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn5aQ9JJV9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn5aQ9JJV9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.1■□□□□ 0.97
Scn5aQ9JJV9 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Scn5aQ9JJV9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms