Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.09■□□□□ 0.81
Tubb3Q9ERD7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tubb3Q9ERD7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tubb3Q9ERD7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tubb3Q9ERD7 Gm22238-201ENSMUST00000175222 88 ntBASIC20.08■□□□□ 0.81
Tubb3Q9ERD7 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.08■□□□□ 0.81
Tubb3Q9ERD7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tubb3Q9ERD7 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.08■□□□□ 0.81
Tubb3Q9ERD7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Tubb3Q9ERD7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Tubb3Q9ERD7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb3Q9ERD7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb3Q9ERD7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb3Q9ERD7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb3Q9ERD7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb3Q9ERD7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb3Q9ERD7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb3Q9ERD7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tubb3Q9ERD7 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb3Q9ERD7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.06■□□□□ 0.8
Tubb3Q9ERD7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.06■□□□□ 0.8
Tubb3Q9ERD7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Tubb3Q9ERD7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tubb3Q9ERD7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tubb3Q9ERD7 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tubb3Q9ERD7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tubb3Q9ERD7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tubb3Q9ERD7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tubb3Q9ERD7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tubb3Q9ERD7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tubb3Q9ERD7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tubb3Q9ERD7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tubb3Q9ERD7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tubb3Q9ERD7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.01■□□□□ 0.79
Tubb3Q9ERD7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tubb3Q9ERD7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tubb3Q9ERD7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tubb3Q9ERD7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
Tubb3Q9ERD7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms