Protein–RNA interactions for Protein: Q9DBU0

Tm9sf1, Transmembrane 9 superfamily member 1, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm9sf1Q9DBU0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tm9sf1Q9DBU0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.19■□□□□ 0.82
Tm9sf1Q9DBU0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tm9sf1Q9DBU0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tm9sf1Q9DBU0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.18■□□□□ 0.82
Tm9sf1Q9DBU0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tm9sf1Q9DBU0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.18■□□□□ 0.82
Tm9sf1Q9DBU0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tm9sf1Q9DBU0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Tm9sf1Q9DBU0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Tm9sf1Q9DBU0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tm9sf1Q9DBU0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.16■□□□□ 0.82
Tm9sf1Q9DBU0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tm9sf1Q9DBU0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.16■□□□□ 0.82
Tm9sf1Q9DBU0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tm9sf1Q9DBU0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tm9sf1Q9DBU0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tm9sf1Q9DBU0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tm9sf1Q9DBU0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tm9sf1Q9DBU0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tm9sf1Q9DBU0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.14■□□□□ 0.82
Tm9sf1Q9DBU0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tm9sf1Q9DBU0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm9sf1Q9DBU0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm9sf1Q9DBU0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm9sf1Q9DBU0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tm9sf1Q9DBU0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Tm9sf1Q9DBU0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tm9sf1Q9DBU0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm9sf1Q9DBU0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Tm9sf1Q9DBU0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.12■□□□□ 0.81
Tm9sf1Q9DBU0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tm9sf1Q9DBU0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm9sf1Q9DBU0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm9sf1Q9DBU0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tm9sf1Q9DBU0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tm9sf1Q9DBU0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tm9sf1Q9DBU0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Tm9sf1Q9DBU0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm9sf1Q9DBU0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.09■□□□□ 0.81
Tm9sf1Q9DBU0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.09■□□□□ 0.81
Tm9sf1Q9DBU0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.09■□□□□ 0.81
Tm9sf1Q9DBU0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm9sf1Q9DBU0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm9sf1Q9DBU0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tm9sf1Q9DBU0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm9sf1Q9DBU0 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm9sf1Q9DBU0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm9sf1Q9DBU0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tm9sf1Q9DBU0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms