Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.5■□□□□ 0.71
Sh2d4aQ9D7V1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.49■□□□□ 0.71
Sh2d4aQ9D7V1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sh2d4aQ9D7V1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.47■□□□□ 0.71
Sh2d4aQ9D7V1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh2d4aQ9D7V1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh2d4aQ9D7V1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh2d4aQ9D7V1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh2d4aQ9D7V1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh2d4aQ9D7V1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2d4aQ9D7V1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2d4aQ9D7V1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2d4aQ9D7V1 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.44■□□□□ 0.7
Sh2d4aQ9D7V1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2d4aQ9D7V1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2d4aQ9D7V1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh2d4aQ9D7V1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sh2d4aQ9D7V1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sh2d4aQ9D7V1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d4aQ9D7V1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d4aQ9D7V1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d4aQ9D7V1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sh2d4aQ9D7V1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.41■□□□□ 0.7
Sh2d4aQ9D7V1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.41■□□□□ 0.7
Sh2d4aQ9D7V1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms