Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Upk3bl1Q9D701 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Upk3bl1Q9D701 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.33■□□□□ 0.53
Upk3bl1Q9D701 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upk3bl1Q9D701 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upk3bl1Q9D701 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Upk3bl1Q9D701 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Upk3bl1Q9D701 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upk3bl1Q9D701 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Upk3bl1Q9D701 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.33■□□□□ 0.52
Upk3bl1Q9D701 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Upk3bl1Q9D701 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Golph3-205ENSMUST00000228671 2842 ntBASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upk3bl1Q9D701 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.31■□□□□ 0.52
Upk3bl1Q9D701 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Upk3bl1Q9D701 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upk3bl1Q9D701 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Upk3bl1Q9D701 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.31■□□□□ 0.52
Upk3bl1Q9D701 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Upk3bl1Q9D701 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Upk3bl1Q9D701 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upk3bl1Q9D701 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Upk3bl1Q9D701 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Upk3bl1Q9D701 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Upk3bl1Q9D701 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upk3bl1Q9D701 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upk3bl1Q9D701 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Upk3bl1Q9D701 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk3bl1Q9D701 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk3bl1Q9D701 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.27■□□□□ 0.52
Upk3bl1Q9D701 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk3bl1Q9D701 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk3bl1Q9D701 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Upk3bl1Q9D701 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Upk3bl1Q9D701 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk3bl1Q9D701 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk3bl1Q9D701 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms