Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp48Q9D361 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp48Q9D361 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp48Q9D361 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp48Q9D361 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp48Q9D361 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Snrnp48Q9D361 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Snrnp48Q9D361 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Snrnp48Q9D361 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Snrnp48Q9D361 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
Snrnp48Q9D361 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.14■□□□□ 0.81
Snrnp48Q9D361 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp48Q9D361 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Snrnp48Q9D361 Gm12922-201ENSMUST00000120626 809 ntBASIC20.14■□□□□ 0.81
Snrnp48Q9D361 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.14■□□□□ 0.81
Snrnp48Q9D361 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Snrnp48Q9D361 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Snrnp48Q9D361 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp48Q9D361 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp48Q9D361 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp48Q9D361 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp48Q9D361 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp48Q9D361 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.13■□□□□ 0.81
Snrnp48Q9D361 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.13■□□□□ 0.81
Snrnp48Q9D361 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Snrnp48Q9D361 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Snrnp48Q9D361 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snrnp48Q9D361 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Snrnp48Q9D361 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snrnp48Q9D361 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Snrnp48Q9D361 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Snrnp48Q9D361 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Snrnp48Q9D361 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Snrnp48Q9D361 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Notumos-201ENSMUST00000151998 2659 ntBASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Snrnp48Q9D361 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms