Protein–RNA interactions for Protein: Q9D0P8

Ift27, Intraflagellar transport protein 27 homolog, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift27Q9D0P8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Ift27Q9D0P8 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ift27Q9D0P8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ift27Q9D0P8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.4■□□□□ 0.54
Ift27Q9D0P8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ift27Q9D0P8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ift27Q9D0P8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift27Q9D0P8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Ift27Q9D0P8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ift27Q9D0P8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ift27Q9D0P8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Ift27Q9D0P8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ift27Q9D0P8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift27Q9D0P8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.39■□□□□ 0.53
Ift27Q9D0P8 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift27Q9D0P8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.39■□□□□ 0.53
Ift27Q9D0P8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift27Q9D0P8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift27Q9D0P8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ift27Q9D0P8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ift27Q9D0P8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.37■□□□□ 0.53
Ift27Q9D0P8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Ift27Q9D0P8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ift27Q9D0P8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift27Q9D0P8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift27Q9D0P8 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ift27Q9D0P8 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Ift27Q9D0P8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ift27Q9D0P8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms