Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Gm7417-201ENSMUST00000192950 473 ntBASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shmt2Q9CZN7 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shmt2Q9CZN7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shmt2Q9CZN7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.24■□□□□ 0.67
Shmt2Q9CZN7 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shmt2Q9CZN7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Shmt2Q9CZN7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shmt2Q9CZN7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shmt2Q9CZN7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shmt2Q9CZN7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shmt2Q9CZN7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shmt2Q9CZN7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shmt2Q9CZN7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shmt2Q9CZN7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shmt2Q9CZN7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shmt2Q9CZN7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shmt2Q9CZN7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Shmt2Q9CZN7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shmt2Q9CZN7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 Gm14117-201ENSMUST00000122417 843 ntBASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shmt2Q9CZN7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shmt2Q9CZN7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Shmt2Q9CZN7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.19■□□□□ 0.66
Shmt2Q9CZN7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Shmt2Q9CZN7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms