Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Snf8Q9CZ28 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snf8Q9CZ28 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Snf8Q9CZ28 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Snf8Q9CZ28 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Snf8Q9CZ28 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snf8Q9CZ28 Iqck-206ENSMUST00000208658 2891 ntBASIC20.82■□□□□ 0.92
Snf8Q9CZ28 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Snf8Q9CZ28 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.82■□□□□ 0.92
Snf8Q9CZ28 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.82■□□□□ 0.92
Snf8Q9CZ28 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.82■□□□□ 0.92
Snf8Q9CZ28 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Snf8Q9CZ28 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Snf8Q9CZ28 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Snf8Q9CZ28 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Snf8Q9CZ28 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.81■□□□□ 0.92
Snf8Q9CZ28 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.81■□□□□ 0.92
Snf8Q9CZ28 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Snf8Q9CZ28 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snf8Q9CZ28 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Snf8Q9CZ28 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snf8Q9CZ28 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snf8Q9CZ28 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snf8Q9CZ28 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Snf8Q9CZ28 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Snf8Q9CZ28 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snf8Q9CZ28 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Snf8Q9CZ28 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Snf8Q9CZ28 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snf8Q9CZ28 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Snf8Q9CZ28 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Snf8Q9CZ28 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Snf8Q9CZ28 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Snf8Q9CZ28 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Snf8Q9CZ28 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Snf8Q9CZ28 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Snf8Q9CZ28 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Snf8Q9CZ28 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snf8Q9CZ28 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Snf8Q9CZ28 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snf8Q9CZ28 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Snf8Q9CZ28 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Snf8Q9CZ28 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Snf8Q9CZ28 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.75■□□□□ 0.91
Snf8Q9CZ28 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Snf8Q9CZ28 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Snf8Q9CZ28 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.72■□□□□ 0.91
Snf8Q9CZ28 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Snf8Q9CZ28 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms