Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Chd1lQ9CXF7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chd1lQ9CXF7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Chd1lQ9CXF7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.87■■□□□ 1.25
Chd1lQ9CXF7 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Chd1lQ9CXF7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chd1lQ9CXF7 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chd1lQ9CXF7 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Chd1lQ9CXF7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chd1lQ9CXF7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chd1lQ9CXF7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.86■■□□□ 1.25
Chd1lQ9CXF7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC22.86■■□□□ 1.25
Chd1lQ9CXF7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chd1lQ9CXF7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chd1lQ9CXF7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chd1lQ9CXF7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chd1lQ9CXF7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chd1lQ9CXF7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chd1lQ9CXF7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Chd1lQ9CXF7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chd1lQ9CXF7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chd1lQ9CXF7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chd1lQ9CXF7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.83■■□□□ 1.25
Chd1lQ9CXF7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chd1lQ9CXF7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Chd1lQ9CXF7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Chd1lQ9CXF7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Chd1lQ9CXF7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chd1lQ9CXF7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chd1lQ9CXF7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Chd1lQ9CXF7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.81■■□□□ 1.24
Chd1lQ9CXF7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chd1lQ9CXF7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chd1lQ9CXF7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC22.81■■□□□ 1.24
Chd1lQ9CXF7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chd1lQ9CXF7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chd1lQ9CXF7 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.8■■□□□ 1.24
Chd1lQ9CXF7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Chd1lQ9CXF7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Chd1lQ9CXF7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Chd1lQ9CXF7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Chd1lQ9CXF7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chd1lQ9CXF7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chd1lQ9CXF7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chd1lQ9CXF7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.78■■□□□ 1.24
Chd1lQ9CXF7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chd1lQ9CXF7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chd1lQ9CXF7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.78■■□□□ 1.24
Chd1lQ9CXF7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.77■■□□□ 1.24
Chd1lQ9CXF7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.77■■□□□ 1.24
Chd1lQ9CXF7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chd1lQ9CXF7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Chd1lQ9CXF7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.77■■□□□ 1.23
Chd1lQ9CXF7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Chd1lQ9CXF7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Chd1lQ9CXF7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Chd1lQ9CXF7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chd1lQ9CXF7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.76■■□□□ 1.23
Chd1lQ9CXF7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chd1lQ9CXF7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Gm27502-201ENSMUST00000183495 199 ntBASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Chd1lQ9CXF7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chd1lQ9CXF7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.74■■□□□ 1.23
Chd1lQ9CXF7 Golph3-205ENSMUST00000228671 2842 ntBASIC22.74■■□□□ 1.23
Chd1lQ9CXF7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms