Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx47Q9CWX9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx47Q9CWX9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx47Q9CWX9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx47Q9CWX9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx47Q9CWX9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx47Q9CWX9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx47Q9CWX9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Ddx47Q9CWX9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx47Q9CWX9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Ddx47Q9CWX9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ddx47Q9CWX9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx47Q9CWX9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ddx47Q9CWX9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx47Q9CWX9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx47Q9CWX9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.75■□□□□ 0.91
Ddx47Q9CWX9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx47Q9CWX9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx47Q9CWX9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx47Q9CWX9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx47Q9CWX9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx47Q9CWX9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx47Q9CWX9 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Ddx47Q9CWX9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx47Q9CWX9 Golph3-205ENSMUST00000228671 2842 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms