Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rtn4rQ99PI8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rtn4rQ99PI8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rQ99PI8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rQ99PI8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rQ99PI8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.81■□□□□ 0.44
Rtn4rQ99PI8 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.81■□□□□ 0.44
Rtn4rQ99PI8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rQ99PI8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rQ99PI8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rtn4rQ99PI8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.8■□□□□ 0.44
Rtn4rQ99PI8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rtn4rQ99PI8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rQ99PI8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rtn4rQ99PI8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rQ99PI8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rQ99PI8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rQ99PI8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rQ99PI8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rQ99PI8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rtn4rQ99PI8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4rQ99PI8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rtn4rQ99PI8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rtn4rQ99PI8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Gm43530-201ENSMUST00000195920 274 ntBASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rtn4rQ99PI8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rtn4rQ99PI8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rQ99PI8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.73■□□□□ 0.43
Rtn4rQ99PI8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rQ99PI8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rtn4rQ99PI8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms