Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col25a1Q99MQ5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Col25a1Q99MQ5 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.08■□□□□ 0.97
Col25a1Q99MQ5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Col25a1Q99MQ5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Col25a1Q99MQ5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Col25a1Q99MQ5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.08■□□□□ 0.96
Col25a1Q99MQ5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Smad6-203ENSMUST00000179458 273 ntBASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Col25a1Q99MQ5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 Mir5133-201ENSMUST00000174955 77 ntBASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Col25a1Q99MQ5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Col25a1Q99MQ5 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.05■□□□□ 0.96
Col25a1Q99MQ5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.05■□□□□ 0.96
Col25a1Q99MQ5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Col25a1Q99MQ5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col25a1Q99MQ5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col25a1Q99MQ5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
Col25a1Q99MQ5 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col25a1Q99MQ5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col25a1Q99MQ5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col25a1Q99MQ5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Col25a1Q99MQ5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.01■□□□□ 0.95
Col25a1Q99MQ5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col25a1Q99MQ5 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col25a1Q99MQ5 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Col25a1Q99MQ5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col25a1Q99MQ5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col25a1Q99MQ5 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col25a1Q99MQ5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col25a1Q99MQ5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col25a1Q99MQ5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Col25a1Q99MQ5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col25a1Q99MQ5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Col25a1Q99MQ5 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21■□□□□ 0.95
Col25a1Q99MQ5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21■□□□□ 0.95
Col25a1Q99MQ5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21■□□□□ 0.95
Col25a1Q99MQ5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col25a1Q99MQ5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col25a1Q99MQ5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col25a1Q99MQ5 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col25a1Q99MQ5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col25a1Q99MQ5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms