Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tlr3Q99MB1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tlr3Q99MB1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.71■■□□□ 1.07
Tlr3Q99MB1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tlr3Q99MB1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tlr3Q99MB1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tlr3Q99MB1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Tlr3Q99MB1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Tlr3Q99MB1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Tlr3Q99MB1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Tlr3Q99MB1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tlr3Q99MB1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Tlr3Q99MB1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Tlr3Q99MB1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tlr3Q99MB1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.69■■□□□ 1.06
Tlr3Q99MB1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Tlr3Q99MB1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Tlr3Q99MB1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tlr3Q99MB1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tlr3Q99MB1 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tlr3Q99MB1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Tlr3Q99MB1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tlr3Q99MB1 Gm21956-201ENSMUST00000179946 522 ntBASIC21.65■■□□□ 1.06
Tlr3Q99MB1 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.65■■□□□ 1.06
Tlr3Q99MB1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.65■■□□□ 1.06
Tlr3Q99MB1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tlr3Q99MB1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tlr3Q99MB1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tlr3Q99MB1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tlr3Q99MB1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tlr3Q99MB1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Tlr3Q99MB1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tlr3Q99MB1 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.64■■□□□ 1.05
Tlr3Q99MB1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tlr3Q99MB1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tlr3Q99MB1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.63■■□□□ 1.05
Tlr3Q99MB1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.63■■□□□ 1.05
Tlr3Q99MB1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.63■■□□□ 1.05
Tlr3Q99MB1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.63■■□□□ 1.05
Tlr3Q99MB1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tlr3Q99MB1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tlr3Q99MB1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.63■■□□□ 1.05
Tlr3Q99MB1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Tlr3Q99MB1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tlr3Q99MB1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tlr3Q99MB1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Tlr3Q99MB1 Gm12922-201ENSMUST00000120626 809 ntBASIC21.62■■□□□ 1.05
Tlr3Q99MB1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.62■■□□□ 1.05
Tlr3Q99MB1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.62■■□□□ 1.05
Tlr3Q99MB1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tlr3Q99MB1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tlr3Q99MB1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Tlr3Q99MB1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms