Protein–RNA interactions for Protein: Q99KP6

Prpf19, Pre-mRNA-processing factor 19, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf19Q99KP6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Prpf19Q99KP6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prpf19Q99KP6 Scarna2-201ENSMUST00000157560 414 ntBASIC19.39■□□□□ 0.69
Prpf19Q99KP6 Gm16437-201ENSMUST00000025669 507 ntBASIC19.39■□□□□ 0.69
Prpf19Q99KP6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf19Q99KP6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf19Q99KP6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prpf19Q99KP6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Prpf19Q99KP6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Prpf19Q99KP6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.39■□□□□ 0.69
Prpf19Q99KP6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Prpf19Q99KP6 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Prpf19Q99KP6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf19Q99KP6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.38■□□□□ 0.69
Prpf19Q99KP6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf19Q99KP6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf19Q99KP6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Prpf19Q99KP6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Prpf19Q99KP6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf19Q99KP6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf19Q99KP6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.37■□□□□ 0.69
Prpf19Q99KP6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf19Q99KP6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf19Q99KP6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf19Q99KP6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Prpf19Q99KP6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prpf19Q99KP6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf19Q99KP6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf19Q99KP6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf19Q99KP6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf19Q99KP6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf19Q99KP6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prpf19Q99KP6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Prpf19Q99KP6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf19Q99KP6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf19Q99KP6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf19Q99KP6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.35■□□□□ 0.69
Prpf19Q99KP6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf19Q99KP6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Prpf19Q99KP6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prpf19Q99KP6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.35■□□□□ 0.69
Prpf19Q99KP6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf19Q99KP6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Prpf19Q99KP6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.34■□□□□ 0.69
Prpf19Q99KP6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf19Q99KP6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Prpf19Q99KP6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prpf19Q99KP6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.33■□□□□ 0.69
Prpf19Q99KP6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.33■□□□□ 0.69
Prpf19Q99KP6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.33■□□□□ 0.68
Prpf19Q99KP6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf19Q99KP6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.33■□□□□ 0.68
Prpf19Q99KP6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Prpf19Q99KP6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf19Q99KP6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf19Q99KP6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf19Q99KP6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prpf19Q99KP6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf19Q99KP6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Prpf19Q99KP6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf19Q99KP6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf19Q99KP6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf19Q99KP6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf19Q99KP6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf19Q99KP6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prpf19Q99KP6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf19Q99KP6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf19Q99KP6 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.31■□□□□ 0.68
Prpf19Q99KP6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf19Q99KP6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf19Q99KP6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prpf19Q99KP6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf19Q99KP6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf19Q99KP6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.3■□□□□ 0.68
Prpf19Q99KP6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf19Q99KP6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf19Q99KP6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf19Q99KP6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf19Q99KP6 Gm11687-201ENSMUST00000118911 886 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms